bicycle
Ubuntu 14.04 LiveCD
The 14.04 Ubuntu Linux 64bit OS LiveCD includes bicycle 1.7.2 along with other popular tools for whole genome bisulfite sequencing data analysis.
List of sofware included in the LiveCD
| Software | Version |
|---|---|
| bsmap | 2.74 |
| BS-Seeker | 1 |
| BS-Seeker2 | 2.1.1 |
| bowtie | 1.0.0 |
| bowtie2 | 2.3.2-legacy |
| Bismark | 0.10.1 |
| samtools | 0.1.19 |
| bsolana | 1_0 |
| socs | 2.2 |
| Brawt-BW | 2.0.1 |
| FadE | 0.0.2 |
| pass | 2.11 |
| batmeth | 1.04b |
| Sherman | 0.1.6 |
| bicycle | 1.7.2 |
| bwa | 0.7.10 |
| bwa-meth | 0.10 |