Welcome to the SEDA manual!

SEDA

• Introduction
• Installation and configuration
  • Docker
• Graphical user interface
  • The Input area
  • The Output area
• Operations
  • Filtering
  • Pattern filtering
  • Base presence filtering
  • Remove redundant sequences
  • Sort
  • Split
  • Regular expression split
  • Reallocate reference sequences
  • Rename header
  • Reformat file
  • Grow sequences
  • NCBI rename
  • Merge
  • Undo alignment
  • Translate
  • Disambiguate sequence names
  • Consensus sequence
  • Concatenate sequences
  • Remove isoforms
  • Compare
  • Blast
  • Blast: two-way ortholog identification
  • Clustal Omega Alignment
• Advanced usage
  • Pattern configuration
  • Regular expressions